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I graduated from the
Computer
Science Department of the University
of Milan in 1990
(Laurea
Degree) specializing in logic-based Artificial Intelligence. From 1990
to 1992
I was a Research Assistant in the same department carrying out research
in
mathematical logic and automated theorem proving. From 1992 to 1996, I
took
part in a cooperative project for Third World Countries development,
aimed at
creating a Computer Science programme at the Catholic University of
Asunción,
Paraguay. At Asunción, I taught several computer science courses
and started
two research groups, on automated theorem proving and machine learning.
In 1996 I joined
the
postgraduate
programme in Computer Science at the University of Toronto,
obtaining
my
PhD in 2002. From 1999 to 2002, I carried out my research at the Gatsby
Computational Neuroscience Unit. During my PhD I specialised in machine
learning under the
supervision of Prof. Geoffrey E. Hinton. I was predominantly involved
in basic research,
and in my thesis I introduced Linear Relational Embedding, a new method
for
solving the problem of learning symbolic relationships from examples.
After completing
my
PhD, I moved
towards Computational Biology. From 2002 to 2006 I was a postdoctoral
associate, first at the Genome Centre of Queen Mary University of
London (in Mansoor Saqi Lab) and
subsequently at the Department of Molecular Biophysics and Biochemistry
of Yale
University (in Mark Gerstein Lab). During this period I developed novel
computational
approaches for
clustering protein sequences, protein remote homology detection, noise
reduction in protein-protein interactions, and prediction of gene
essentiality
from genomic features.
Since February
2006 I
have been
working in the Computer Science Department
at Royal Holloway, University of London,
and I was promoted to Reader in 2008. My research lies in applying
pattern-recognition/machine learning techniques for solving problems in
computational biology.
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